Thanks for contacting us and choosing our product!
Can you please send us your site URL (and maybe an admin account), so we can check it for you.
In our theme have a notice that Page Options will override Theme Options. You can understand more about it follow this topic: https://harutheme.com/forums/topic/why-theme-options-doesnt-apply-changes/
That means you need to Edit Homepage (or page have header, footer, layout,.. different settings in Theme Options) then go to Page Options at bottom of page to compare settings with Theme Options.
Hope this helps!